User`s guide
Chapter 5 Optimizing Instrument Settings
5-58 PerSeptive Biosystems
5
Adjusting laser
intensity
To efficiently optimize the laser setting, increase or decrease 
the laser settings to the mid-setting of a continuously 
decreasing laser window. To adjust the laser settings, 
click-drag the slider bar on the Manual Laser Intensity/Sample 
Positioning control page. For more information, see “Manually 
adjusting laser intensity” on page 4-28.
Adjusting laser intensity depends on the following:
General strategy
As a general strategy for adjusting laser intensity:
• Start at the default setting for your system 
(approximately 1,800), or the setting in the loaded 
.BIC file. 
• If the spectrum you obtain is not acceptable, 
increase or decrease the laser in 50 to 100-step 
increments or decrements and reacquire. For 
more information on acceptable laser signal, see 
“Signal saturation” on page 5-59.
If... Then...
You are using a .BIC file for the 
same mass range and matrix.
Laser intensity may require only minor 
adjustments.
You are using a .BIC file for the 
same mass range, but different 
matrix.
Increase or decrease the laser in 50 to 
100-step increments (or decrements) following 
the strategy described below. For more 
information, see “Selecting a .BIC file” on 
page 5-8, and “Laser intensity and matrix” on 
page 5-57.
You are using default Instrument 
Control Panel settings. The 
mid-range default laser setting if a 
.BIC file is not loaded is 
approximately1,800.
This setting is typically too high for many 
samples and matrix. Decrease the laser in 50 
to 100-step decrements, following the strategy 
described below. For more information, see 
“Laser intensity and matrix” on page 5-57.










