User Guide

GEO Database
Genesifter can upload GEO formatted files
from the Affymetrix platform. The Gene
Expression Omnibus (GEO) is a public
database of microarray data, hosted by the
NCBI (http://www.ncbi.nlm.nih.gov/geo/
)
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1. Query GEO accession
number or the DataSet ID.
2.,3 Alternatively, Browse the
database to find datasets of
interest by selecting
“DataSets”.
4. Select “Geo platform” in the
Sort by pull-down menu to
identify datasets created from
the Affymetrix platform and
thus capable of uploaded into
Genesifter.
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Appendix