User Guide

Scatter Plot
(continued)
5. To identify spots, drag the box over
the region of interest and select
zoom. The chosen region will be
magnified in the box in the upper
right frame (see 6). If the box titled
hide unchanged is selected in the
blue control box prior to zooming, the
magnified box will only show genes
that passed the threshold and
statistical parameters. When
zooming regions that are dense with
spots, hiding the unchanged genes
will generate the zoom box in
significantly less time.
6. You can identify spots by mousing
over them in the zoom box. The
name will be displayed at the top.
7. Clicking on a spot will bring up
experimental information in the lower
right panel.
8. At the bottom right corner of the main
scatter plot window, there is a yellow
box to Open static scatter plot.
Selecting this will generate a full
scatter plot that can be copied,
pasted or saved and inserted into
reports, notebooks, etc.
5
6
7
8