User Guide

Pathway Report

The Pathway Report is available from any gene list

created in GeneSifter by selecting the link for

Reports | KEGG.

Note: The pathway report is currently available only

for human microarrays. The pathway source is from

the Kyoto Encyclopaedia of Genes and Genomes

(KEGG).

1. All pathways from the gene list are

shown.

2. The Genes link displays all genes from

the list that are associated with the

corresponding pathway.

3. The KEGG link displays the

corresponding pathway and highlights

the appropriate gene(s) from the gene

list.

4. Totals:

List – displays how many genes in the

gene list belong to a pathway.

For pairwise analysis this list is

further divided into up-regulated

(red arrow) and down-regulated

(green arrow).

Array – displays how many genes

belonging to a pathway were

measured in the comparison.

Typically this is the number of

genes of a pathway that are

present on the array being used.