Technical data
Agilent 1290 Infinity LC System Manual and Quick Reference 53
Optimization of the Agilent 1290 Infinity LC System
3
How to Achieve High Throughput
How to Achieve High Throughput
Some laboratories operate in a high throughput (HT) environment where the 
workload requires sequences of hundreds or even thousands of injections to 
be made to complete a body of work. In these situations it is highly desirable to 
minimize the cycle times as even a few seconds saved per injection will reduce 
the overall time to complete the work by a significant and useful amount. The 
key steps to achieving fast cycle times and high throughput operation are:
• Using fast separations
• Overlapping injections
• Minimizing equilibration time
• Alternating column regeneration
The first step to achieving high throughput operation is to ensure that the 
methods used have short cycle times, i.e., they are fast chromatography 
methods. The use of short columns with 1.8 µm particle size packing is ideal 
for this purpose because of the high efficiency available in a short column. If 
the methods involve isocratic separation this allows for the fastest cycle times 
because no column equilibration is required between runs. However, most 
often gradient methods are employed due to the range or complexity of the 
samples. In developing the method the gradient range should be kept to the 
minimum required to achieve the separation. In many “open access” systems 
gradients running from 5 % to 95 % organic solvent are used for the greatest 
flexibility to deal with a range of unknown compounds. In the high throughput 
situation it should be considered whether a shorter range will suffice on the 
basis that the expected range of compounds for analysis is reduced and this 
will not only allow the run time to be reduced but will also shorten the 
equilibration time between runs.
The cycle time is made up of a number of parts: Cycle time = injection + 
separation + equilibration + data processing.
With a large number of samples to process even a small reduction in cycle time 
can add up to a large reduction in the overall time to complete the work. For 
this reason the data processing can be taken off-line to allow the system to 
focus on running the samples and collecting data.










