User guide
Table Of Contents
- QuantStudio 3D Digital PCR System User Guide (Pub. no. MAN0007720 Rev. C.0)
- Copyright Page
- Contents
- About this guide
- Chapter 1. Getting Started
- About the QuantStudio® 3D Digital PCR System
- Operating the instrument
- Prepare the QuantStudio® 3D Digital PCR System for use
- Connect the QuantStudio® 3D Instrument to a network
- Connect the QuantStudio® 3D AnalysisSuite™ Software
- Chapter 2. Prepare Samples and Load Reactions
- Chapter 3. Perform the PCR
- Chapter 4. Analyze the Prepared Chips
- Chapter 5. Troubleshooting
- Appendix A. Maintenance
- Appendix B. Networking
- Appendix C. Parts and Materials
- Appendix D. Specifications and Layout
- Appendix E. Safety
- Documentation and support
- Back Cover

About this guide
CAUTION! ABBREVIATED SAFETY ALERTS. Hazard symbols and hazard
types specified in procedures may be abbreviated in this document. For the
complete safety information, see the “Safety” appendix in this document.
IMPORTANT! Before using this product, read and understand the information in the
“Safety” appendix in this document.
Revision history
Revision
Date Description
01 03, 2013 Initial version
02 06, 2013 Updated general chip preparation and instrument networking.
A.0 12, 2013 Updated the manual chip preparation and added procedures for
chip preparation using the QuantStudio
®
3D Digital PCR Chip
Loader and wireless network installation.
B.0 04, 2014 Added support for the ProFlex
™
2x Flat PCR System and revised
the Digital PCR 20K Chip loading instructions.
C.0 02, 2015 Updated for firmware and software revisions, including changes to
instrument networking, thermal cycling, chip analysis,
maintenance, software access, and computer requirements.
Updated to latest corporate boilerplate. Updated general sample
and chip preparation, system installation, troubleshooting, and
parts and materials.
Purpose
This user guide provides step-by-step instructions for preparing and loading samples
onto QuantStudio
®
3D Digital PCR 20K Chips, thermal cycling the prepared
consumables using a
ProFlex
™
2x Flat PCR System (or Dual Flat Block GeneAmp
®
PCR System 9700), and analyzing the consumables using the QuantStudio
®
3D Digital
PCR Instrument.
WARNING! The protection provided by the equipment may be impaired if the
instrument is operated outside the environment and use specifications, the user
provides inadequate maintenance, or the equipment is used in a manner not
specified by the manufacturer (Thermo Fisher Scientific).
8
QuantStudio
®
3D Digital PCR System User Guide