Product specifications
Table Of Contents
- Table of Contents
- 1 Introduction
- 2 Feature Overview
- 3 Step-by-Step Cluster Setup and MPI Usage Checklists
- 4 InfiniPath Cluster Setup and Administration
- Introduction
- Installed Layout
- Memory Footprint
- BIOS Settings
- InfiniPath and OpenFabrics Driver Overview
- OpenFabrics Drivers and Services Configuration and Startup
- Other Configuration: Changing the MTU Size
- Managing the InfiniPath Driver
- More Information on Configuring and Loading Drivers
- Performance Settings and Management Tips
- Host Environment Setup for MPI
- Checking Cluster and Software Status
- 5 Using QLogic MPI
- Introduction
- Getting Started with MPI
- QLogic MPI Details
- Use Wrapper Scripts for Compiling and Linking
- Configuring MPI Programs for QLogic MPI
- To Use Another Compiler
- Process Allocation
- mpihosts File Details
- Using mpirun
- Console I/O in MPI Programs
- Environment for Node Programs
- Environment Variables
- Running Multiple Versions of InfiniPath or MPI
- Job Blocking in Case of Temporary InfiniBand Link Failures
- Performance Tuning
- MPD
- QLogic MPI and Hybrid MPI/OpenMP Applications
- Debugging MPI Programs
- QLogic MPI Limitations
- 6 Using Other MPIs
- A mpirun Options Summary
- B Benchmark Programs
- C Integration with a Batch Queuing System
- D Troubleshooting
- Using LEDs to Check the State of the Adapter
- BIOS Settings
- Kernel and Initialization Issues
- OpenFabrics and InfiniPath Issues
- Stop OpenSM Before Stopping/Restarting InfiniPath
- Manual Shutdown or Restart May Hang if NFS in Use
- Load and Configure IPoIB Before Loading SDP
- Set $IBPATH for OpenFabrics Scripts
- ifconfig Does Not Display Hardware Address Properly on RHEL4
- SDP Module Not Loading
- ibsrpdm Command Hangs when Two Host Channel Adapters are Installed but Only Unit 1 is Connected to the Switch
- Outdated ipath_ether Configuration Setup Generates Error
- System Administration Troubleshooting
- Performance Issues
- QLogic MPI Troubleshooting
- Mixed Releases of MPI RPMs
- Missing mpirun Executable
- Resolving Hostname with Multi-Homed Head Node
- Cross-Compilation Issues
- Compiler/Linker Mismatch
- Compiler Cannot Find Include, Module, or Library Files
- Problem with Shell Special Characters and Wrapper Scripts
- Run Time Errors with Different MPI Implementations
- Process Limitation with ssh
- Number of Processes Exceeds ulimit for Number of Open Files
- Using MPI.mod Files
- Extending MPI Modules
- Lock Enough Memory on Nodes When Using a Batch Queuing System
- Error Creating Shared Memory Object
- gdb Gets SIG32 Signal Under mpirun -debug with the PSM Receive Progress Thread Enabled
- General Error Messages
- Error Messages Generated by mpirun
- MPI Stats
- E Write Combining
- F Useful Programs and Files
- G Recommended Reading
- Glossary
- Index
5–Using QLogic MPI
QLogic MPI Details
5-8 IB6054601-00 H
S
To Use Another Compiler
QLogic MPI supports a number of compilers, in addition to the default GNU
Compiler Collection (GCC) versions 3.3.x, 3.4.x, 4.0, and 4.1 and gfortran. These
include the PathScale Compiler Suite 3.0 and 3.1; PGI 5.2, 6.0, and 7.1; and Intel
9.x and 10.1.
These compilers can be invoked on the command line by passing options to the
wrapper scripts. Command line options override environment variables, if set.
The following tables show the options for each of the compilers.
In each case,
..... stands for the remaining options to the mpicxx script, the
options to the compiler in question, and the names of the files upon which it
operates.
NOTE:
The GNU 4.x environment is supported in the PathScale Compiler Suite 3.x
release. However, the 2.x PathScale compilers are not currently supported
on SLES 10 systems that use the GNU 4.x compilers and compiler
environment (header files and libraries). QLogic recommends installing the
PathScale 3.1 release.
Table 5-3. PathScale Compiler Suite
Compiler Command
C mpicc -cc=pathcc .....
C++ mpicc -CC=pathCC .....
Fortran 77 mpif77 -fc=pathf95 .....
Fortran 90/95 mpif90 -f90=pathf95 .....
mpif90 -f95=pathf95 .....
NOTE: pathf95 invokes the Fortran 77,
Fortran 90, and Fortran 95 compilers.
Table 5-4. Portland Group (PGI)
Compiler Command
C mpicc -cc=pgcc .....
C++ mpicc -CC=pgCC