HP XC System Software Administration Guide Version 4.0
Table Of Contents
- XC Administration Guide
- Table of Contents
- About This Document
- 1 HP XC Administration Environment
- 1.1 Understanding Nodes, Services, and Roles
- 1.2 File System
- 1.3 HP XC Command Environment
- 1.4 Configuration and Management Database
- 1.5 HP XC Configuration File Guidelines
- 1.6 Installation and Software Distribution
- 1.7 Improved Availability
- 1.8 Networking
- 1.9 Modulefiles
- 1.10 Security
- 1.11 Recommended Administrative Tasks
- 2 Improved Availability
- 3 Starting Up and Shutting Down the HP XC System
- 4 Managing and Customizing System Services
- 4.1 HP XC System Services
- 4.2 Displaying Services Information
- 4.3 Restarting a Service
- 4.4 Stopping a Service
- 4.5 Global System Services
- 4.6 Customizing Services and Roles
- 4.6.1 Overview of the HP XC Services Configuration
- 4.6.2 Service Configuration Sequence of Operation
- 4.6.3 Assigning Roles with the cluster_config Utility
- 4.6.4 The *config.d Directories
- 4.6.5 Configuration Scripts
- 4.6.6 Understanding Global Configuration Scripts
- 4.6.7 Advance Planning
- 4.6.8 Editing the roles_services.ini File
- 4.6.9 Creating a service.ini File
- 4.6.10 Adding a New Service
- 4.6.11 Verifying a New Service
- 5 Managing Licenses
- 6 Managing the Configuration and Management Database
- 6.1 Accessing the Configuration and Management Database
- 6.2 Querying the Configuration and Management Database
- 6.3 Finding and Setting System Attribute Values
- 6.4 Backing Up the Configuration Database
- 6.5 Restoring the Configuration Database from a Backup File
- 6.6 Archiving Sensor Data from the Configuration Database
- 6.7 Restoring the Sensor Data from an Archive File
- 6.8 Purging Sensor Data from the Configuration and Management Database
- 6.9 Dumping the Configuration and Management Database
- 7 Monitoring the System
- 7.1 Monitoring Tools
- 7.2 Monitoring Strategy
- 7.3 Displaying System Environment Data
- 7.4 Monitoring Disks
- 7.5 Displaying System Statistics
- 7.6 Logging Node Events
- 7.7 The collectl Utility
- 7.8 Using HP Graph To Display Network Bandwidth and System Use
- 7.9 The resmon Utility
- 7.10 The kdump Mechanism and the crash Utility
- 8 Monitoring the System with Nagios
- 8.1 Nagios Overview
- 8.2 Using the Nagios Web Interface
- 8.3 Adjusting the Nagios Configuration
- 8.4 Configuring Nagios on HP XC Systems
- 8.5 Using the Nan Notification Aggregator and Delimiter To Control Nagios Messages
- 8.6 Nagios Report Generator Utility
- 8.7 Modifying Nagios To Effect Changes
- 9 Network Administration
- 10 Managing Patches and RPM Updates
- 11 Distributing Software Throughout the System
- 11.1 Overview of the Image Replication and Distribution Environment
- 11.2 Installing and Distributing Software Patches
- 11.3 Adding Software or Modifying Files on the Golden Client
- 11.4 Determining Which Nodes Will Be Imaged
- 11.5 Updating the Golden Image
- 11.6 Propagating the Golden Image to All Nodes
- 11.7 Maintaining a Global Service Configuration
- 12 Opening an IP Port in the Firewall
- 13 Connecting to a Remote Console
- 14 Managing Local User Accounts and Passwords
- 14.1 HP XC User and Group Accounts
- 14.2 General Procedures for Administering Local User Accounts
- 14.3 Adding a Local User Account
- 14.4 Modifying a Local User Account
- 14.5 Deleting a Local User Account
- 14.6 Configuring the ssh Keys for a User
- 14.7 Synchronizing the NIS Database
- 14.8 Changing Administrative Passwords
- 14.8.1 Changing the Superuser Password
- 14.8.2 Changing the CMDB Password
- 14.8.3 Changing the Interconnect Password
- 14.8.4 Changing the Console Port Password
- 14.8.5 Synchronizing the BMC/IPMI Password for CP6000 Systems
- 14.8.6 Changing the Nagios Administrator Password
- 14.8.7 Changing the LSF Administrator Password
- 15 Managing SLURM
- 16 Managing LSF
- 16.1 Standard LSF
- 16.2 LSF with SLURM
- 16.3 Switching the Type of LSF Installed
- 16.4 LSF with SLURM Installation
- 16.5 LSF with SLURM Startup and Shutdown
- 16.6 Controlling the LSF with SLURM Service
- 16.7 Launching Jobs with LSF with SLURM
- 16.8 Monitoring and Controlling LSF with SLURM Jobs
- 16.9 Maintaining Shell Prompts in LSF Interactive Shells
- 16.10 Job Accounting
- 16.11 LSF Daemon Log Maintenance
- 16.12 Load Indexes and Resource Information
- 16.13 LSF with SLURM Monitoring
- 16.14 LSF with SLURM Failover
- 16.15 Moving SLURM and LSF Daemons to Their Backup Nodes
- 16.16 Enhancing LSF with SLURM
- 16.17 Configuring an External Virtual Host Name for LSF with SLURM on HP XC Systems
- 17 Managing Modulefiles
- 18 Mounting File Systems
- 19 Managing Software RAID Arrays
- 20 Using Diagnostic Tools
- 20.1 Using the sys_check Utility
- 20.2 Using the ovp Utility for System Verification
- 20.3 Using the dgemm Utility to Analyze Performance
- 20.4 Using the System Interconnect Diagnostic Tools
- 21 Troubleshooting
- 21.1 General Troubleshooting
- 21.2 Nagios Troubleshooting
- 21.3 Messages Reported by Nagios
- 21.4 System Interconnect Troubleshooting
- 21.5 Improved Availability Issues
- 21.5.1 How To Start HP Serviceguard When Only the Head Node is Running
- 21.5.2 Restart Serviceguard Quorum Server if Quorum Server Node is Re-imaged
- 21.5.3 Known Limitation if Nagios is Configured for Improved Availability
- 21.5.4 Network Restart Command Negatively Affects Serviceguard
- 21.5.5 Problem Failing Over Database Package Under Serviceguard
- 21.6 SLURM Troubleshooting
- 21.7 LSF Troubleshooting
- 22 Servicing the HP XC System
- 22.1 Adding a Node
- 22.2 Replacing a Client Node
- 22.3 Actualizing Planned Nodes
- 22.4 Replacing a Server Blade Enclosure OnBoard Administrator
- 22.5 Replacing a System Interconnect Board in an HP CP6000 System
- 22.6 Software RAID Disk Replacement
- 22.7 Incorporating External Network Interface Cards
- 22.7.1 Gathering Information
- 22.7.2 Editing the platform_vars.ini File
- 22.7.3 Using the device_config Command
- 22.7.4 Updating the Database for the External Network Card
- 22.7.5 Updating the Firewall Custom Configuration
- 22.7.6 Reconfiguring the Nodes
- 22.7.7 Verifying Success
- 22.7.8 Updating the Golden Image
- A Installing LSF with SLURM into an Existing Standard LSF Cluster
- B Setting Up MPICH
- C HP MCS Monitoring
- D CPU Frequency-Based Power-Saving Feature
- Glossary
- Index

Table 16-3 Environment Variables for LSF with SLURM Enhancement (lsf.conf File) (continued)
DescriptionEnvironment Variable
This setting enables Platform LSF extensions.
This setting is undefined by default.
The following extension names are supported:
• SHORT_EVENTFILE
This compresses long host name lists when event records are
written to the lsb.events and lsb.acct files for large parallel
jobs. The short host string has the format:
number_of_hosts*real_host_name
When SHORT_EVENTFILE is enabled, older daemons and
commands (prior to LSF Version 7.3) cannot recognize the
lsb.acct and lsb.events file format. For example, the original
host list record is as follows:
6 "hostA" "hostA" "hostA" "hostA" "hostB" "hostC"
Redundant host names are removed and the host count is changed
so that the short host list record is as follows:
3 "4*hostA" "hostB" "hostC"
When LSF_HPC_EXTENSION="SHORT_EVENTFILE" is set, and
LSF reads the host list from the lsb.events or lsb.acct files,
the compressed host list is expanded into a normal host list. This
setting applies to the following events:
— JOB_START — when a normal job is dispatched.
— JOB_FORCE — when a job is forced with the brun command.
— JOB_CHUNK — when a job is inserted into a job chunk.
— JOB_FORWARD — when a job is forwarded to a MultiCluster
leased host.
— JOB_FINISH in lsb.acct.
• SHORT_PIDLIST
This shortens the output from the bjobs command to eliminate
many of the process IDs (PIDs) for a job. The bjobs command
displays only the first ID and a count of the process group IDs
(PGIDs) and process IDs for the job. Without the SHORT_PIDLIST
setting, the bjobs -l command displays all the PGIDs and PIDs
for the job. With SHORT_PIDLIST set, the bjobs -l command
displays a count of the PGIDs and PIDs.
• RESERVE_BY_STARTTIME
LSF with SLURM selects the reservation that gives the job the
earliest predicted start time. By default, if multiple host groups
are available for reservation, LSF with SLURM chooses the largest
possible reservation based on the number of slots. When backfill
is configured, this can lead to larger jobs not running as their start
times are pushed further into the future.
• BRUN_WITH_TOPOLOGY
If a topology request can be satisfied for a brun job, brun preserves
the topology request. LSF with SLURM allocates the resource
according to the request and tries to run the job with the requested
topology. If allocation fails because the topology request cannot
be satisfied, the job is queued again. By default, the job topology
request is ignored by the scheduler when it creates an allocation
if BRUN_WITH_TOPOLOGY is not specified.
LSF_HPC_EXTENSIONS="ext_name,..."
This entry in the lsf.conf file defines how any two
LSF_HPC_NCPU_* thresholds are combined.
The default value is or.
LSF_HPC_NCPU_COND=and|or
16.16 Enhancing LSF with SLURM 209