Software Updates User guide
CFX96 Touch, CFX96 Touch Deep Well, CFX Connect, and CFX384 Touch Systems Instruction Manual
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Table 20. Menu bar items in the Data Analysis window.
Menu Item Command Function
File Save Save the file
Save As Save the file with a new name
Repeat Run Extract the protocol and plate file from the 
current run to rerun it
Close Close the Data Analysis window
View Run Log Open a Run Log window to view the run 
log of the current data file
Quantification, Melt Curve, 
Gene Expression, End Point, 
Custom Data View, QC, Run
Information
Select the tabs displayed in the Data 
Analysis window. At least one tab
must be selected
Settings C
q
 Determination Mode Select Regression or Single Threshold 
mode to determine how C
q
 values are 
calculated for each trace
Baseline Setting Select Baseline Subtraction method for 
the selected well groups
Analysis Mode Select to analyze data by Fluorophore or 
by Target
Cycles to Analyze Select the cycles that are to be analyzed
Baseline Thresholds Open the Baseline Thresholds window to 
adjust the baseline or the threshold
Trace Styles Open the Trace Styles window
Plate Setup Open the Plate Editor to view and edit the 
plate; replace the current plate with one 
from a user-defined plate file or a 
PrimePCR run file
Include All Excluded Wells All excluded wells are included in the 
analysis
Mouse Highlighting Turn on or off the simultaneous 
highlighting of data with the mouse 
pointer
TIP: If Mouse Highlighting is turned off, 
hold down the Control key to temporarily 
turn on highlighting.
Restore Default Window Layout Restores the arrangement of windows to 
the default setting
Export Export All Data Sheets to Excel Export all the spreadsheet views from 
every tab to a separate Excel file
Export RDML File Select a version of RDML (1.1 or 1.0) to 
open a Save As window to specify an 
RDML file name and location
Custom Export... Open the Custom Export window in which 
the fields to be exported and the file 
format can be specified










