Software Updates User guide
CFX96 Touch, CFX96 Touch Deep Well, CFX Connect, and CFX384 Touch Systems Instruction Manual
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NOTE: Well contents can also be copied and pasted into other wells. To do this, 
highlight the well that is to be copied (only one well can be copied at a time), right-
click, and select Copy Well. Highlight the wells into which content is be pasted and 
select Paste Well. Depress and hold the control key to select non-contiguous wells 
to paste content into. 
Experiment Settings Window
To open the Experiment Settings window, perform one of these options:
• In the Plate Editor, click the Experiment Settings button
• While analyzing data in the Data Analysis window, click the Experiment Settings 
button in the Gene Expression tab
Click the Dilution Series button to enter a dilution series 
for the concentration of Standard samples, and load a 
standard curve.
Enter the Starting Concentration for the dilution series, 
the Replicates from (starting replicate number) and to 
(ending replicate number), and the Dilution Factor 
(amount to change the concentration with each replicate 
group). Select Increasing for a dilution series that 
increases or select Decreasing for a dilution series that 
decreases. Finally, select the fluorophore used for the 
dilution series from the pull-down menu and click Apply
Check the Well Notes box on the bottom to show this 
pane. Enter notes about one or more wells by selecting 
the wells and typing the notes in the pull-down menu. Any 
notes you add appear in the spreadsheet on the 
Quantification Data tab
Check the Biological Set Name box on the bottom to 
show this pane. Enter biological set information about one 
or more wells by selecting the wells and typing a 
biological set name in the pull-down menu. Entering 
Biological Set Name information enables sample 
analysis in one of four configurations defined by the 
Biological Set Analysis Options
Click the Experiment Settings button to open the 
Experiment Settings window to manage the lists of 
Targets and Samples and to set up a gene expression run
Click the Clear Replicate # button to clear the replicate 
numbers in the selected wells
Click the Clear Wells button to permanently remove all 
content in the selected wells
Table 17. Options for loading the plate and wells in the Plate Editor. (continued)
Option Function










