Installation manual
Operating in Electron Impact (EI) Mode 3
5975 Series MSD Operation Manual 75
To tune the MSD
You can also use the Local Control Panel to run the autotune that is currently 
loaded in the PC memory. See “Operating the MSD from the LCP” .
Procedure
1 In the Instrument Control View, verify the correct tune file is loaded. For 
most applications, ATUNE.U (Autotune) gives good results. STUNE.U 
(Standard Tune) is not recommended as it may reduce sensitivity.
Consider Gain autotune (GAIN.U + HiSense.U). This tunes to a target gain 
rather than a target abundance. It offers excellent reproducibility, both of 
run-to-run abundance but also between different instruments, 
2 Set the system to the same conditions (GC oven temperature and column 
flow, and MSD analyzer temperatures) that will be used for data 
acquisition.
3 Select Tune MSD to perform a complete tune, or select Quick Tune to adjust 
peak width, mass assignment, and abundance, without changing ion ratios. 
If your system is configured for CI, you will be able to access the CI Tune 
panel from this box. The tune will start immediately.
4 Wait for the tune to complete and to generate the report.
Save your tune reports. To view history of tune results, select 
Checkout>View Previous Tunes....
To manually tune your MSD or to perform special autotunes, go to the Tune 
and Vacuum Control View.
From this Tune menu, in addition to the tunes available from Instrument 
Control, you can select special autotunes for specific spectral results, such as 
DFTPP Tune or BFB Tune.
See the manuals or online help provided with your MSD ChemStation software 
for additional information about tuning.










